The Transformers #0 (2005)

Infiltration #1 (2006)
Infiltration #2
Infiltration #3
Infiltration #4
Infiltration #5
Infiltration #6

Spotlight: Shockwave #1 (2006)

Spotlight: Nightbeat #1 (2006)

Spotlight: Hot Rod #1 (2006)

Spotlight: Sixshot #1 (2006)

Spotlight: Ultra Magnus #1 (2007)

Stormbringer #1 (2006)
Stormbringer #2
Stormbringer #3
Stormbringer #4

Megatron Origin #1 (2007)
Megatron Origin #2
Megatron Origin #3
Megatron Origin #4

Escalation #1 (2006)
Escalation #2
Escalation #3
Escalation #4
Escalation #5
Escalation #6

Spotlight: Soundwave #1 (2007)

Spotlight: Kup #1 (2007)

Spotlight: Galvatron #1 (2007)

Spotlight: Optimus Prime #1 (2007)

Spotlight: Ramjet #1 (2007)

Devastation #1 (2007)
Devastation #2
Devastation #3
Devastation #4
Devastation #5
Devastation #6

Spotlight: Blaster #1 (2008)

Spotlight: Arcee #1 (2008)

Spotlight: Mirage #1 (2008)

Spotlight: Grimlock #1 (2008)

Spotlight: Wheelie #1 (2008)

Spotlight: Cyclones #1 (2008)

Spotlight: Hardhead #1 (2008)

Spotlight: Doubledealer #1 (2008)

Spotlight: Sideswipe #1 (2008)

Maximum Dinobots #1 (2008)
Maximum Dinobots #2
Maximum Dinobots #3
Maximum Dinobots #4
Maximum Dinobots #5

All Hail Megatron #1 (2008)
All Hail Megatron #2
All Hail Megatron #3
All Hail Megatron #4
All Hail Megatron #5
All Hail Megatron #6
All Hail Megatron #7
All Hail Megatron #8
All Hail Megatron #9
All Hail Megatron #10
All Hail Megatron #11
All Hail Megatron #12

Spotlight: Blurr #1 (2008)

Spotlight: Jazz #1 (2009)

Spotlight: Drift #1 (2009)

Spotlight: Cliffjumper #1 (2009)

Spotlight: Metroplex #1 (2009)

All Hail Megatron #13
All Hail Megatron #14
All Hail Megatron #15
All Hail Megatron #16

The Transformers #1 (2009)
The Transformers #2
The Transformers #3
The Transformers #4
The Transformers #5
The Transformers #6

Bumblebee #1 (2009)
Bumblebee #2
Bumblebee #3
Bumblebee #4

The Transformers #7
The Transformers #8

The Transformers: Infestation #1 (2011)
The Transformers: Infestation #2

The Transformers #9
The Transformers #10
The Transformers #11
The Transformers #12

Ironhide #1 (2010)
Ironhide #2
Ironhide #3
Ironhide #4

The Transformers #13
The Transformers #14
The Transformers #15
The Transformers #16
The Transformers #17
The Transformers #18

Heart of Darkness #1 (2011)
Heart of Darkness #2
Heart of Darkness #3
Heart of Darkness #4

The Transformers #19
The Transformers #20
The Transformers #21
The Transformers #22
The Transformers #23

Last Stand of the Wreckers #1 (2010)
Last Stand of the Wreckers #2
Last Stand of the Wreckers #3
Last Stand of the Wreckers #4
Last Stand of the Wreckers #5

Spotlight: Prowl #1 (2010)

The Transformers #25

The Transformers #27

The Transformers #29

Drift #1 (2010)
Drift #2
Drift #3
Drift #4

The Transformers #24

The Transformers #26

The Transformers #28

The Transformers #30
The Transformers #31

The Death of Optimus Prime #1 (2011)

More Than Meets the Eye #1 (2012)
More Than Meets the Eye #2
More Than Meets the Eye #3
More Than Meets the Eye #4
More Than Meets the Eye #5

Robots in Disguise #1 (2012)
Robots in Disguise #2
Robots in Disguise #3
Robots in Disguise #4
Robots in Disguise #5
Robots in Disguise #6

Autocracy was a 12 chapter digital-first story that was later published as a four issue limited series.

Autocracy #1 (2012)
Autocracy #2
Autocracy #3
Autocracy #4
Autocracy #5
Autocracy #6
Autocracy #7
Autocracy #8
Autocracy #9
Autocracy #10
Autocracy #11
Autocracy #12

Spotlight: Orion Pax #1 (2012)

Spotlight: Thundercracker #1 (2013)

Spotlight: Megatron #1 (2013)

Spotlight: Bumblebee #1 (2013)

Spotlight: Trailcutter #1 (2013)

Spotlight: Hoist #1 (2013)

More Than Meets the Eye #6
More Than Meets the Eye #7
More Than Meets the Eye #8

Robots in Disguise #7
Robots in Disguise #8
Robots in Disguise #9

More Than Meets the Eye Annual #1 (2012)

Robots in Disguise Annual #1 (2012)

More Than Meets the Eye #9
More Than Meets the Eye #10
More Than Meets the Eye #11
More Than Meets the Eye #12
More Than Meets the Eye #13

Robots in Disguise #10
Robots in Disguise #11

Monstrosity was a 12 chapter digital-first story that was later published as a four issue limited series.

Monstrosity #1 (2013)
Monstrosity #2
Monstrosity #3
Monstrosity #4
Monstrosity #5
Monstrosity #6
Monstrosity #7
Monstrosity #8
Monstrosity #9
Monstrosity #10
Monstrosity #11
Monstrosity #12

Robots in Disguise #12
Robots in Disguise #13
Robots in Disguise #14
Robots in Disguise #15
Robots in Disguise #16
Robots in Disguise #17
Robots in Disguise #18

More Than Meets the Eye #14
More Than Meets the Eye #15
More Than Meets the Eye #16

Robots in Disguise #19
Robots in Disguise #20
Robots in Disguise #21
Robots in Disguise #22

More Than Meets the Eye #17
More Than Meets the Eye #18
More Than Meets the Eye #19
More Than Meets the Eye #20
More Than Meets the Eye #21
More Than Meets the Eye #22

Dark Cybertron #1 (2013)

More Than Meets the Eye #23

Robots in Disguise #23

More Than Meets the Eye #24

Robots in Disguise #24

More Than Meets the Eye #25

Robots in Disguise #25

More Than Meets the Eye #26

Robots in Disguise #26

More Than Meets the Eye #27

Robots in Disguise #27

Dark Cybertron: Finale #1 (2014)

Windblade #1 (2014)
Windblade #2
Windblade #3
Windblade #4

Robots in Disguise #28
Robots in Disguise #29
Robots in Disguise #30
Robots in Disguise #31
Robots in Disguise #32

More Than Meets the Eye #28
More Than Meets the Eye #29
More Than Meets the Eye #30
More Than Meets the Eye #31
More Than Meets the Eye #32
More Than Meets the Eye #33

Punishment #1 (2014)
Punishment #2
Punishment #3
Punishment #4
Punishment #5

The Transformers: Redemption #1 (2015)

Robots in Disguise #33
Robots in Disguise #34

After Robots in Disguise #34 the series is retitled The Transformers Vol. 2.

The Transformers Vol. 2 #35
The Transformers Vol. 2 #36
The Transformers Vol. 2 #37
The Transformers Vol. 2 #38

More Than Meets the Eye #34
More Than Meets the Eye #35
More Than Meets the Eye #36
More Than Meets the Eye #37
More Than Meets the Eye #38

Primacy #1 (2014)
Primacy #2
Primacy #3
Primacy #4

Drift: Empire of Stone #1 (2014)
Drift: Empire of Stone #2
Drift: Empire of Stone #3
Drift: Empire of Stone #4

The Transformers Vol. 2 #39

Windblade Vol. 2 #1 (2015)

The Transformers Vol. 2 #40

Windblade Vol. 2 #2

The Transformers Vol. 2 #41

Windblade Vol. 2 #3

The Transformers Vol. 2 #42

Windblade Vol. 2 #4

The Transformers: Combiner Hunters #1 (2015)

More Than Meets the Eye #39
More Than Meets the Eye #40
More Than Meets the Eye #41
More Than Meets the Eye #42
More Than Meets the Eye #43
More Than Meets the Eye #44

The Transformers Vol. 2 #43
The Transformers Vol. 2 #44
The Transformers Vol. 2 #45

Windblade Vol. 2 #5
Windblade Vol. 2 #6
Windblade Vol. 2 #7

More Than Meets the Eye #45
More Than Meets the Eye #46
More Than Meets the Eye #47
More Than Meets the Eye #48
More Than Meets the Eye #49

The Transformers Vol. 2 #46
The Transformers Vol. 2 #47
The Transformers Vol. 2 #48
The Transformers Vol. 2 #49

The Transformers: Holiday Special #1 (2015)

Sins of the Wreckers #1 (2015)
Sins of the Wreckers #2
Sins of the Wreckers #3
Sins of the Wreckers #4
Sins of the Wreckers #5

More Than Meets the Eye #50
More Than Meets the Eye #51
More Than Meets the Eye #52
More Than Meets the Eye #53
More Than Meets the Eye #54
More Than Meets the Eye #55

The Transformers Vol. 2 #50
The Transformers Vol. 2 #51
The Transformers Vol. 2 #52
The Transformers Vol. 2 #53
The Transformers Vol. 2 #54
The Transformers Vol. 2 #55

Titans Return #1 (2016)

Till All Are One #1 (2016)
Till All Are One #2
Till All Are One #3
Till All Are One #4

The Transformers Vol. 2 #56
The Transformers Vol. 2 #57

More Than Meets the Eye #56
More Than Meets the Eye #57

Till All Are One #5
Till All Are One #6

Read Revolution here.

Optimus Prime #1 (2016)
Optimus Prime #2
Optimus Prime #3
Optimus Prime #4
Optimus Prime #5

Lost Light #1 (2016)
Lost Light #2
Lost Light #3
Lost Light #4

Till All Are One #7
Till All Are One #8
Till All Are One #9

The Transformers Annual #1 (2017)